PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN32887.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 93aa    MW: 10333.6 Da    PI: 5.8344
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN32887.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92.1e-0921601554
                HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                +i + +++L++l+P+ + + +s K+s + +L+++++YIksL
  KHN32887.1 21 QITDIISKLQQLIPElD-ARRSDKVSASKVLQETCNYIKSL 60
                78999**********55.99********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.312660IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.8E-102182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.6E-72160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-92175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    Send to blast
MSSRRSRSSQ SDVSTEITDA QITDIISKLQ QLIPELDARR SDKVSASKVL QETCNYIKSL  60
HREVDDLSDR LSQLLATTDS NSAQAAIIRS LLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150342e-59AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003551974.15e-58PREDICTED: transcription factor PRE6-like
SwissprotQ8GW323e-38PRE6_ARATH; Transcription factor PRE6
TrEMBLA0A0B2RM156e-58A0A0B2RM15_GLYSO; Transcription factor bHLH135
TrEMBLI1N1706e-58I1N170_SOYBN; Uncharacterized protein
STRINGGLYMA18G15920.12e-57(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56734143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.12e-39bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]